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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015853402.1_cds_XP_016512250.1_24911
CDS Infomation

[gene=LOC107829287] [db_xref=GeneID:107829287] [protein=viridiflorene synthase-like] [protein_id=XP_016512250.1] [location=complement(join(4694..4990,5078..5323,5433..5571,5662..5880,5962..6340,6423..6699,6766..6876))] [gbkey=CDS]
Sequence

ATGGCCCAAGCTGCCCTCATTAACAACGATGAGAAGATTGTTCGTCCAGTTGCCAATTTC
TCTCCAAGTCTTTGGGGTGACAGTTTCCATTCATTCTCTGTTGACAATCAGGTGGCAGAA
AAATATGGTCAAGAGATTGAAACATTGAAGGAGGAAACAAGGAGTATGTTGGGAGCAGCT
TGTGAAAGATCATTGGCTGAAAAGCTGAATCTGATAGACACTGTTGAGCGCCTTGGCTTA
GCTTATCATTTTGAGAAACAAATAGAAGACATGTTGGATGAGATTTATAAAGAAGATCCA
AACTTTGAAGGTCATGAGTACAATGATTTGTACACTTGTGCCCTTCAATTTCGAATGTTG
AGACAACATGGTTACAATATCTCCCCAAAAATTTTCAGCAGATTCCAAGACGCAAACGGA
AAATTCAAGGAGTCTCTTAGTCTTAGTAATGATGCAAAGGGTCTATTGAGCTTATACGAA
GCTTCACATGTAAGGATTCATGGAGAGGATATTTTGGAAGAGGCACTTGCTTTTGCCACT
GCTCATCTTGAATCTGCAACTCCACATTTGAAGTCACCTCTGAGTAAGCAAGTGATGCAT
GCTCTTGAGCAATCTCTGCATAAAAGCATTCCAAGAGTGGAGACGCGTTACTTCATCTCT
ATCTACGAAGAGGAGGAACTGAAAAATGATGTGCTACTTCGATTTGCTAAATTAGATTAC
AACTTACTTCAGATTTTGCATAAACAAGAACTCAGCCAAGTATCAAGGTGGTGGAAAGAT
TTGGATTTTGTGACAACACTTCCATATGCTAGGGATAGAGCTGTTGAATGCTACTTTTGG
ACGATGGGGGTGTATGCTGAACCTCAATATTCTCAGGCTCGTGTCATGCTTGCTAAGACT
ATAGCAATGATTTCGATAGTAGATGACACATTCGATGCTTATGGCATTGTAAAAGAACTT
GAGGTCTACACTGATGCCATACAGAGGTGGGATATTAGTCAAATTGATCGACTCCCAGAC
TACATGAAAATCAGTTTTAAGGCTCTTATAGACCTTTATGAAGATTATGAAAAGGAATTG
TCAACGGATGGCAGATCCTATGTTGTCCACTATGCGAAAGAAAGAATGAAGGAAATTGTG
AGAAATTATTTTGTCGAAGCAAAGTGGTTCATTGAGGGATATATGCCACCTGTTTCTGAG
TATCTTAACAATGCATTAGCTACTAGCACATATTACTTGCTAACTACAACATCCTACTTG
GGAATGAAATCAGCTGCCAGGGAAGATTTTGAGTGGTTGGCTACCAACCCTAAAATTTTG
GAAGCCAATGTAACATTATGTCGAGTTGTAGATGACATTGCCACATATGAGGTTGAGAAG
GGTAGGGGCCAAATTGCAACAGGAATTGAGTGTTATATGAGGGATTATGGCGTATCAACA
GAAGTAGCAATGGAAAAATTCCAAGAAATGGCTGAGATAGCATGGAAGGATGTGAATGAA
GGAATTCTTCGACCAACTCCTGTTTCTACAGAAATTCTCACTCGTATTCTCAATCTCGCT
CGTATTATAGATGTCACTTACAAGCACAATCAAGATGGATACACTCATCCAGAAAAGGTT
CTAAAACCTCACATCATCGCTTTACTGGTGGACTCCATTGAAATCTAA

Peptide Sequence

PEP ID

XP_016512250.1
PEP Infomation

PREDICTED: viridiflorene synthase-like [Nicotiana tabacum]
Sequence

MAQAALINNDEKIVRPVANFSPSLWGDSFHSFSVDNQVAEKYGQEIETLKEETRSMLGAA
CERSLAEKLNLIDTVERLGLAYHFEKQIEDMLDEIYKEDPNFEGHEYNDLYTCALQFRML
RQHGYNISPKIFSRFQDANGKFKESLSLSNDAKGLLSLYEASHVRIHGEDILEEALAFAT
AHLESATPHLKSPLSKQVMHALEQSLHKSIPRVETRYFISIYEEEELKNDVLLRFAKLDY
NLLQILHKQELSQVSRWWKDLDFVTTLPYARDRAVECYFWTMGVYAEPQYSQARVMLAKT
IAMISIVDDTFDAYGIVKELEVYTDAIQRWDISQIDRLPDYMKISFKALIDLYEDYEKEL
STDGRSYVVHYAKERMKEIVRNYFVEAKWFIEGYMPPVSEYLNNALATSTYYLLTTTSYL
GMKSAAREDFEWLATNPKILEANVTLCRVVDDIATYEVEKGRGQIATGIECYMRDYGVST
EVAMEKFQEMAEIAWKDVNEGILRPTPVSTEILTRILNLARIIDVTYKHNQDGYTHPEKV
LKPHIIALLVDSIEI

Transcript Sequence

Gene sequence data has not been registered.